23 pig breeds EPO-Extended
This alignment has been generated in Ensembl release 114 and is composed of 13,009 blocks (up to 994,589 bp long).
API access
| Species | Assembly | Genome length (bp) | Genome coverage (bp) | Genome coverage (%) | Coding exon length (bp) | Coding exon coverage (bp) | Coding exon coverage (%) |
|---|---|---|---|---|---|---|---|
| Sheep (Ovis aries) | ARS-UI_Ramb_v2.0 | 2,628,146,905 | 2,510,051,798 | 95.51 | 36,241,706 | 34,845,379 | 96.15 |
| Cattle (Bos taurus) | ARS-UCD2.0 | 2,770,686,120 | 2,552,399,397 | 92.12 | 35,918,484 | 34,074,280 | 94.87 |
| Pig - Wuzhishan (Sus scrofa) | minipig_v1.0 | 2,508,912,457 | 2,303,492,713 | 91.81 | 32,216,998 | 30,387,481 | 94.32 |
| Pig - Berkshire (Sus scrofa) | Berkshire_pig_v1 | 2,434,706,773 | 2,302,403,144 | 94.57 | 34,511,197 | 33,274,234 | 96.42 |
| Pig - Tibetan (Sus scrofa) | Tibetan_Pig_v2 | 2,437,742,524 | 2,249,223,841 | 92.27 | 33,242,148 | 31,689,434 | 95.33 |
| Pig - Hampshire (Sus scrofa) | Hampshire_pig_v1 | 2,437,109,612 | 2,310,504,889 | 94.81 | 34,573,096 | 33,318,240 | 96.37 |
| Pig USMARC (Sus scrofa) | USMARCv1.0 | 2,755,438,035 | 2,315,245,976 | 84.02 | 35,166,034 | 32,983,351 | 93.79 |
| Pig - PB115 (Sus scrofa) | CAU-K | 2,444,985,074 | 2,317,969,998 | 94.81 | 35,284,272 | 33,652,828 | 95.38 |
| Pig - euw1 (european wild boar) (Sus scrofa) | ASM2165605v1 | 2,457,990,317 | 2,322,349,121 | 94.48 | 32,847,998 | 31,469,981 | 95.80 |
| Pig - Pietrain (Sus scrofa) | Pietrain_pig_v1 | 2,438,316,299 | 2,307,544,442 | 94.64 | 34,368,936 | 33,169,767 | 96.51 |
| Pig - NIHS-2020 (Sus scrofa) | ASM1855540v1 | 2,598,860,052 | 2,329,342,187 | 89.63 | 36,548,658 | 34,338,918 | 93.95 |
| Pig - Duroc (Sus scrofa) | Ninghe_Sus_1 | 2,458,257,385 | 2,331,580,136 | 94.85 | 31,082,983 | 30,223,785 | 97.24 |
| Pig (Sus scrofa) | Sscrofa11.1 | 2,501,912,388 | 2,358,100,996 | 94.25 | 35,448,596 | 33,803,604 | 95.36 |
| Pig - Ossabaw miniature (Sus scrofa) | ASM2471841v1 | 2,455,681,563 | 2,324,598,309 | 94.66 | 35,510,875 | 33,753,641 | 95.05 |
| Pig - Largewhite (Sus scrofa) | Large_White_v1 | 2,457,907,103 | 2,316,066,001 | 94.23 | 34,666,066 | 33,452,685 | 96.50 |
| Pig - Landrace (Sus scrofa) | Landrace_pig_v1 | 2,440,981,886 | 2,306,806,376 | 94.50 | 34,646,469 | 33,410,031 | 96.43 |
| Pig - Meishan (Sus scrofa) | Meishan_pig_v1 | 2,467,495,771 | 2,303,185,591 | 93.34 | 34,405,547 | 33,187,608 | 96.46 |
| Pig - Bama miniature (Sus scrofa) | ASM764409v1 | 2,491,069,675 | 2,312,321,327 | 92.82 | 35,806,036 | 33,945,971 | 94.81 |
| Pig - Jinhua (Sus scrofa) | Jinhua_pig_v1 | 2,453,702,738 | 2,304,588,179 | 93.92 | 34,359,345 | 33,162,787 | 96.52 |
| Pig - Bamei (Sus scrofa) | Bamei_pig_v1 | 2,460,755,741 | 2,304,429,472 | 93.65 | 34,436,299 | 33,217,551 | 96.46 |
| Pig - Rongchang (Sus scrofa) | Rongchang_pig_v1 | 2,459,027,728 | 2,307,982,543 | 93.86 | 34,688,475 | 33,543,427 | 96.70 |
| Pig - Ningxiang (Sus scrofa domesticus) | ASM2056790v1 | 2,440,961,843 | 2,323,201,128 | 95.18 | 35,175,308 | 33,665,047 | 95.71 |
| Horse (Equus caballus) | EquCab3.0 | 2,506,966,135 | 2,282,869,264 | 91.06 | 38,317,516 | 35,760,560 | 93.33 |
Block size distribution
| Size range | All 13,009 alignment blocks | |
|---|---|---|
| # blocks | Total size (incl. gaps) | |
| 10 bp - 100 bp | 1 |
44.0 bp |
| 100 bp - 1 kb | 20 |
10.1 kb |
| 1 kb - 10 kb | 251 |
1.5 Mb |
| 10 kb - 100 kb | 5,620 |
253.6 Mb |
| 100 kb - 1 Mb | 4,213 |
1.6 Gb |
| 1 Mb - 10 Mb | 2,904 |
2.9 Gb |