31 primates Cactus
This alignment has been generated in Ensembl release 113 and is composed of 1,134,431 blocks (up to 173,099 bp long).
API access
| Species | Assembly | Genome length (bp) | Genome coverage (bp) | Genome coverage (%) | Coding exon length (bp) | Coding exon coverage (bp) | Coding exon coverage (%) |
|---|---|---|---|---|---|---|---|
| Human (Homo sapiens) | GRCh38 | 3,099,750,718 | 2,722,174,181 | 87.82 | 38,571,754 | 36,929,296 | 95.74 |
| Bonobo (Pan paniscus) | panpan1.1 | 3,286,643,896 | 2,638,359,035 | 80.28 | 33,835,525 | 32,974,221 | 97.45 |
| Chimpanzee (Pan troglodytes) | Pan_tro_3.0 | 3,231,170,666 | 2,685,708,306 | 83.12 | 37,531,681 | 34,347,211 | 91.52 |
| Gorilla (Gorilla gorilla gorilla) | gorGor4 | 3,063,362,794 | 2,624,603,600 | 85.68 | 34,567,330 | 33,067,849 | 95.66 |
| Sumatran orangutan (Pongo abelii) | Susie_PABv2 | 3,065,052,215 | 2,626,440,853 | 85.69 | 34,106,545 | 32,772,171 | 96.09 |
| Gibbon (Nomascus leucogenys) | Nleu_3.0 | 2,962,060,179 | 2,486,559,743 | 83.95 | 33,058,749 | 31,630,462 | 95.68 |
| Olive baboon (Papio anubis) | Panubis1.0 | 2,869,821,163 | 2,491,276,748 | 86.81 | 36,172,917 | 32,354,104 | 89.44 |
| Gelada (Theropithecus gelada) | Tgel_1.0 | 2,889,614,139 | 2,505,802,551 | 86.72 | 34,265,288 | 32,440,416 | 94.67 |
| Drill (Mandrillus leucophaeus) | Mleu.le_1.0 | 3,062,009,387 | 2,423,909,262 | 79.16 | 32,678,726 | 30,876,236 | 94.48 |
| Sooty mangabey (Cercocebus atys) | Caty_1.0 | 2,848,246,356 | 2,486,776,476 | 87.31 | 34,351,134 | 32,723,833 | 95.26 |
| Macaque (Macaca mulatta) | Mmul_10 | 2,971,331,530 | 2,508,959,055 | 84.44 | 37,308,545 | 33,612,855 | 90.09 |
| Crab-eating macaque (Macaca fascicularis) | Macaca_fascicularis_6.0 | 2,906,155,132 | 2,474,880,571 | 85.16 | 34,070,036 | 31,844,173 | 93.47 |
| Pig-tailed macaque (Macaca nemestrina) | Mnem_1.0 | 2,948,703,511 | 2,491,804,981 | 84.51 | 34,342,625 | 32,651,815 | 95.08 |
| Vervet-AGM (Chlorocebus sabaeus) | ChlSab1.1 | 2,789,656,328 | 2,492,595,792 | 89.35 | 31,292,716 | 30,000,249 | 95.87 |
| Golden snub-nosed monkey (Rhinopithecus roxellana) | Rrox_v1 | 2,899,552,139 | 2,489,335,460 | 85.85 | 33,867,875 | 31,975,742 | 94.41 |
| Black snub-nosed monkey (Rhinopithecus bieti) | ASM169854v1 | 2,977,074,946 | 2,466,458,222 | 82.85 | 32,924,301 | 31,166,151 | 94.66 |
| Angola colobus (Colobus angolensis palliatus) | Cang.pa_1.0 | 2,970,124,662 | 2,443,405,453 | 82.27 | 32,983,514 | 31,453,206 | 95.36 |
| Ugandan red Colobus (Piliocolobus tephrosceles) | ASM277652v2 | 3,038,007,327 | 2,489,806,492 | 81.96 | 37,080,613 | 31,977,046 | 86.24 |
| Bolivian squirrel monkey (Saimiri boliviensis boliviensis) | SaiBol1.0 | 2,608,588,537 | 2,172,536,181 | 83.28 | 32,349,188 | 30,025,829 | 92.82 |
| Panamanian white-faced capuchin (Cebus imitator) | Cebus_imitator-1.0 | 2,717,703,182 | 2,134,071,608 | 78.52 | 33,329,722 | 29,314,166 | 87.95 |
| Ma's night monkey (Aotus nancymaae) | Anan_2.0 | 2,861,668,348 | 2,245,706,539 | 78.48 | 33,534,099 | 30,806,615 | 91.87 |
| White-tufted-ear marmoset (Callithrix jacchus) | mCalJac1.pat.X | 2,829,711,198 | 2,289,193,097 | 80.90 | 36,931,356 | 32,553,419 | 88.15 |
| Coquerel's sifaka (Propithecus coquereli) | Pcoq_1.0 | 2,798,152,141 | 1,449,644,489 | 51.81 | 29,815,600 | 27,044,840 | 90.71 |
| Greater bamboo lemur (Prolemur simus) | Prosim_1.0 | 2,411,593,676 | 1,536,172,091 | 63.70 | 32,178,253 | 28,832,951 | 89.60 |
| Mouse Lemur (Microcebus murinus) | Mmur_3.0 | 2,487,409,138 | 1,618,493,246 | 65.07 | 32,222,963 | 28,664,098 | 88.96 |
| Bushbaby (Otolemur garnettii) | OtoGar3 | 2,519,404,493 | 1,672,023,447 | 66.37 | 31,659,618 | 28,011,070 | 88.48 |
| Tarsier (Carlito syrichta) | Tarsius_syrichta-2.0.1 | 3,453,864,774 | 1,729,271,381 | 50.07 | 28,501,270 | 25,145,507 | 88.23 |
| Mouse (Mus musculus) | GRCm39 | 2,728,222,451 | 1,151,743,594 | 42.22 | 39,092,596 | 29,154,434 | 74.58 |
| Green anole (Anolis carolinensis) | AnoCar2.0v2 | 1,799,143,587 | 36,592,877 | 2.03 | 37,303,061 | 8,117,166 | 21.76 |
| Chicken (Gallus gallus) | bGalGal1.mat.broiler.GRCg7b | 1,053,332,251 | 36,490,259 | 3.46 | 31,304,036 | 8,744,411 | 27.93 |
| Tropical clawed frog (Xenopus tropicalis) | UCB_Xtro_10.0 | 1,451,301,209 | 12,504,843 | 0.86 | 39,972,159 | 4,379,477 | 10.96 |
Block size distribution
| Size range | All 1,134,431 alignment blocks | |
|---|---|---|
| # blocks | Total size (incl. gaps) | |
| 10 bp - 100 bp | 63,840 |
2.9 Mb |
| 100 bp - 1 kb | 199,774 |
100.6 Mb |
| 1 kb - 10 kb | 748,794 |
3.1 Gb |
| 10 kb - 100 kb | 122,016 |
1.9 Gb |
| 100 kb - 1 Mb | 7 |
864.8 kb |