Dog vs Domestic cat Synteny results
The syntenic regions between Dog (Canis lupus familiaris, ROS_Cfam_1.0) and Domestic cat (Felis catus, F.catus_Fca126_mat1.0) were extracted from their pairwise alignment in Ensembl release 114. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 156 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Dog |
Uncovered: 60,178,669 out of 2,396,858,295 |
Uncovered: 384,762 out of 35,281,463 |
| Domestic cat |
Uncovered: 25,975,348 out of 2,425,730,029 |
Uncovered: 190,004 out of 35,378,147 |