Zebrafish vs Pinecone soldierfish Synteny results
The syntenic regions between Zebrafish (Danio rerio, GRCz11) and Pinecone soldierfish (Myripristis murdjan, fMyrMur1.1) were extracted from their pairwise alignment in Ensembl release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 494 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Zebrafish |
Uncovered: 1,047,937,294 out of 1,373,471,384 |
Uncovered: 33,883,644 out of 42,031,845 |
| Pinecone soldierfish |
Uncovered: 586,524,646 out of 835,254,674 |
Uncovered: 29,530,020 out of 39,636,610 |