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Human vs Goat Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Goat (Capra hircus, ARS1) were extracted from their pairwise alignment in Ensembl release 92. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 366 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 493,524,931 out of 3,099,750,718
Covered: 2,606,225,787 out of 3,099,750,718

Uncovered: 2,428,305 out of 38,571,754
Covered: 36,143,449 out of 38,571,754

Goat

Uncovered: 485,632,801 out of 2,922,813,246
Covered: 2,437,180,445 out of 2,922,813,246

Uncovered: 2,341,601 out of 33,933,515
Covered: 31,591,914 out of 33,933,515