Human vs Chimpanzee Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Chimpanzee (Pan troglodytes, Pan_tro_3.0) were extracted from their pairwise alignment in Ensembl release 91. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 192 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 247,135,036 out of 3,099,750,718 |
Uncovered: 285,820 out of 38,571,754 |
| Chimpanzee |
Uncovered: 353,270,838 out of 3,231,170,666 |
Uncovered: 1,814,415 out of 37,531,681 |