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Human vs Bonobo Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Bonobo (Pan paniscus, panpan1.1) were extracted from their pairwise alignment in Ensembl release 91. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 222 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 282,876,495 out of 3,099,750,718
Covered: 2,816,874,223 out of 3,099,750,718

Uncovered: 545,380 out of 38,571,754
Covered: 38,026,374 out of 38,571,754

Bonobo

Uncovered: 475,620,768 out of 3,286,643,896
Covered: 2,811,023,128 out of 3,286,643,896

Uncovered: 406,847 out of 33,835,525
Covered: 33,428,678 out of 33,835,525