Human vs Pig Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Pig (Sus scrofa, Sscrofa11.1) were extracted from their pairwise alignment in Ensembl release 90. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 295 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 341,895,228 out of 3,099,750,718 |
Uncovered: 1,228,317 out of 38,571,754 |
| Pig |
Uncovered: 131,104,930 out of 2,501,912,388 |
Uncovered: 1,548,468 out of 35,448,596 |