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Human vs Rabbit Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Rabbit (Oryctolagus cuniculus, OryCun2.0) were extracted from their pairwise alignment in Ensembl release 76. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 242 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 830,630,295 out of 3,099,750,718
Covered: 2,269,120,423 out of 3,099,750,718

Uncovered: 11,407,735 out of 38,571,754
Covered: 27,164,019 out of 38,571,754

Rabbit

Uncovered: 574,599,363 out of 2,737,490,501
Covered: 2,162,891,138 out of 2,737,490,501

Uncovered: 8,810,426 out of 34,042,187
Covered: 25,231,761 out of 34,042,187