Pig - NIHS-2020 assembly and gene annotation

Name: Ensembl Pig - NIHS-2020 Gene Set
Creator: Ensembl
License: https://www.apache.org/licenses/LICENSE-2.0
Keywords: genebuild, transcripts, transcription, alignment, loci

Assembly

Gene annotation

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assembly	ASM1855540v1, INSDC Assembly GCA_018555405.1, May 2021
Base Pairs	2,598,860,052
Golden Path Length	2,598,860,052
Annotation provider	Ensembl
Annotation method	Full genebuild
Genebuild started	Jan 2023
Genebuild released
Genebuild last updated/patched	Sep 2023
Database version	115.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	23,017
Non coding genes	18,136
Small non coding genes	2,494
Long non coding genes	15,626
Misc non coding genes	16
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	997
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	80,011

Pig - NIHS-2020 assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

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Pig - NIHS-2020 assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

About Us

Get help

Our sister sites

Follow us