Assembly
The ASM1855540v1 assembly was submitted by National Institute of Health Sciences and last updated on 2021-05-27. The assembly is on the contig level, consisting of 1001 contigs assembled into 1001 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 24612887 while the scaffold N50 is 24612887.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | ASM1855540v1, INSDC Assembly GCA_018555405.1, May 2021 |
| Base Pairs | 2,598,860,052 |
| Golden Path Length | 2,598,860,052 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Jan 2023 |
| Genebuild released | |
| Genebuild last updated/patched | Sep 2023 |
| Database version | 116.1 |
Gene counts
| Coding genes | 23,017 |
| Non coding genes | 18,136 |
| Small non coding genes | 2,494 |
| Long non coding genes | 15,626 |
| Misc non coding genes | 16 |
| Pseudogenes | 997 |
| Gene transcripts | 80,011 |
