Assembly
The Ninghe_Sus_1 assembly was submitted by China Agricultural University and last updated on 2023-01-29. The assembly is on the chromosome level, consisting of 1660 contigs assembled into 70 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 4265198 while the scaffold N50 is 137575542.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | Ninghe_Sus_1, INSDC Assembly GCA_015776825.1, Dec 2020 |
| Base Pairs | 2,458,257,385 |
| Golden Path Length | 2,458,257,385 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Jan 2023 |
| Genebuild released | |
| Genebuild last updated/patched | Aug 2023 |
| Database version | 116.1 |
Gene counts
| Coding genes | 19,550 |
| Non coding genes | 19,290 |
| Small non coding genes | 1,936 |
| Long non coding genes | 17,337 |
| Misc non coding genes | 17 |
| Pseudogenes | 1,541 |
| Gene transcripts | 72,059 |
