Assembly
The ARS-UI_Ramb_v3.0 assembly was submitted by University of Idaho and last updated on 2024-07-26. The assembly is on the chromosome level, consisting of 227 contigs assembled into 143 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 43178051 while the scaffold N50 is 101274418.
Other assemblies
- Oar_v3.1 (Ensembl release 114)
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | ARS-UI_Ramb_v3.0, INSDC Assembly GCA_016772045.2, Jul 2023 | 
| Base Pairs | 2,654,063,983 | 
| Golden Path Length | 2,654,063,983 | 
| Annotation provider | Ensembl | 
| Annotation method | Full genebuild | 
| Genebuild started | Jan 2024 | 
| Genebuild released | |
| Genebuild last updated/patched | Dec 2024 | 
| Database version | 115.3 | 
Gene counts
| Coding genes | 19,878 | 
| Non coding genes | 36,948 | 
| Small non coding genes | 2,914 | 
| Long non coding genes | 34,015 | 
| Misc non coding genes | 19 | 
| Pseudogenes | 234 | 
| Gene transcripts | 95,666 | 
Other
| Short Variants | 0 | 
| Structural variants | 2 | 
