Chicken (Red Jungle fowl) assembly and gene annotation

Name: Ensembl Chicken (Red Jungle fowl) Variation Data
License: https://www.apache.org/licenses/LICENSE-2.0
Keywords: SNP, polymorphism, insertion, deletion, CNV, copy number variant

Assembly

Gene annotation

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assembly	GRCg6a, INSDC Assembly GCA_000002315.5, Mar 2018
Base Pairs	1,065,365,425
Golden Path Length	1,065,365,425
Annotation provider	Ensembl
Annotation method	Full genebuild
Genebuild started	Sep 2021
Genebuild released
Genebuild last updated/patched	Jan 2022
Database version	115.6

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	17,077
Non coding genes	13,729
Small non coding genes	1,275
Long non coding genes	12,449
Misc non coding genes	5
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	56
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	74,296

Other

Short Variants

26,022,099

Chicken (Red Jungle fowl) assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

Other

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Chicken (Red Jungle fowl) assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

Other

About Us

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