Assembly
The EquAss-T2T_v2 assembly was submitted by University of Kentucky and last updated on 2025-06-27. The assembly is on the chromosome level, consisting of 855 contigs assembled into 848 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 102829910 while the scaffold N50 is 101318199.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | EquAss-T2T_v2, INSDC Assembly GCA_041296235.2, Dec 2024 |
| Base Pairs | 2,797,772,842 |
| Golden Path Length | 2,797,772,842 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Feb 2025 |
| Genebuild released | |
| Genebuild last updated/patched | May 2025 |
| Database version | 116.2 |
Gene counts
| Coding genes | 19,983 |
| Non coding genes | 21,336 |
| Small non coding genes | 3,916 |
| Long non coding genes | 17,411 |
| Misc non coding genes | 9 |
| Pseudogenes | 199 |
| Gene transcripts | 103,997 |
