Dog - German Shepherd assembly and gene annotation

Assembly

Gene annotation

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assembly	UU_Cfam_GSD_1.0, INSDC Assembly GCA_011100685.1, Mar 2020
Base Pairs	2,481,983,352
Golden Path Length	2,481,983,352
Annotation provider	Ensembl
Annotation method	Full genebuild
Genebuild started	Mar 2021
Genebuild released
Genebuild last updated/patched	Mar 2021
Database version	112.10

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	21,063
Non coding genes	9,659
Small non coding genes	3,097
Long non coding genes	6,540
Misc non coding genes	22
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	676
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	57,308

Other

Genscan gene predictions

82,097

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